Research/art/teacher profile of a person

I. - Basic information

I.1 - Surname

Petijová

I.2 - Name

Linda

I.3 - Degrees

RNDr., PhD.

I.4 - Year of birth

1985

I.5 - Name of the workplace

Pavol Jozef Šafárik University in Košice, Faculty of Science, Institute of Biology and Ecology, Department of Genetics

I.6 - Address of the workplace

Mánesova 23, 041 54 Košice, Slovakia

I.7 - Position

assistant professor

I.8 - E-mail address

linda.petijova@upjs.sk

I.9 - Hyperlink to the entry of a person in the Register of university staff

https://www.portalvs.sk/regzam/detail/25832

I.10 - Name of the study field in which a person works at the university

Biology

I.11 - ORCID iD

0000-0002-9700-8409

II. - Higher education and further qualification growth

II.1 - First degree of higher education

II.2 - Second degree of higher education

II.a - Name of the university or institution

Pavol Jozef Šafárik University in Košice, Faculty of Science

II.b - Year

2009

II.c - Study field and programme

Two-subject teaching programme Mathematics and biology

II.3 - Third degree of higher education

II.a - Name of the university or institution

Pavol Jozef Šafárik University in Košice, Faculty of Science, Institute of Biology and Ecology

II.b - Year

2015

II.c - Study field and programme

Genetics, 4.2.4 Genetics

II.4 - Associate professor

II.5 - Professor

II.6 - Doctor of Science (DrSc.)

III. - Current and previous employment

III.a - Occupation-position	III.b - Institution	III.c - Duration
Assistant professor	Pavol Jozef Šafárik University in Košice, Faculty of Science, Institute of Biology and Ecology	01.01.2018 - present
Research worker	Pavol Jozef Šafárik University in Košice, Faculty of Science, Institute of Biology and Ecology	01.01.2016 - 31.12.2017

IV. - Development of pedagogical, professional, language, digital and other skills

IV.a - Activity description, course name, other	IV.b - Name of the institution	IV.c - Year
PRACE Seasonal School on Bioinformatics	Computing Centre, Slovak Academy of Sciences, Bratislava, Slovak Republic	2018

V. - Overview of activities within the teaching career at the university

V.1 - Overview of the profile courses taught in the current academic year according to study programmes

V.1.a - Name of the profile course	V.1.b - Study programme	V.1.c - Degree	V.1.d - Field of study
UBEV/GEP/12 Population genetics	GMCm (Genetics and Molecular Cytology)	Master	Biology
UBEV/FG/14	GMCm (Genetics and Molecular Cytology)	Master

V.2 - Overview of the responsibility for the delivery, development and quality assurance of the study programme or its part at the university in the current academic year

V.3 - Overview of the responsibility for the development and quality of the field of habilitation procedure and inaugural procedure in the current academic year

V.4 - Overview of supervised final theses

V.4.1 - Number of currently supervised theses

V.4.a - Bachelor's (first degree)

V.4.b - Diploma (second degree)

V.4.c - Dissertation (third degree)

V.4.2 - Number of defended theses

V.4.a - Bachelor's (first degree)

V.4.b - Diploma (second degree)

V.4.c - Dissertation (third degree)

V.5 - Overview of other courses taught in the current academic year according to study programmes

VI. - Overview of the research/artistic/other outputs

VI.1 - Overview of the research/artistic/other outputs and the corresponding citations

VI.1.1 - Number of the research/artistic/other outputs

VI.1.a - Overall

VI.1.b - Over the last six years

VI.1.2 - Number of the research/artistic/other outputs registered in the Web of Science or Scopus databases

VI.1.a - Overall

VI.1.b - Over the last six years

VI.1.3 - Number of citations corresponding to the research/artistic/other outputs

VI.1.a - Overall

161

VI.1.b - Over the last six years

132

VI.1.4 - Number of citations registered in the Web of Science or Scopus databases

VI.1.a - Overall

161

VI.1.b - Over the last six years

132

VI.1.5 - Number of invited lectures at the international, national level

VI.1.a - Overall

VI.1.b - Over the last six years

VI.2 - The most significant research/artistic/other outputs

Linda Petijová, Jana Henzelyová, Júlia Kuncová, Martina Matoušková, Eva Čellárová: In silico prediction of polyketide biosynthetic gene clusters in the genomes of Hypericum-borne endophytic fungi. BMC Genomics (2024), doi: 10.1186/s12864-024-10475-z

Wen Zhou, Ying Wang, Bin Li, Linda Petijová, Suying Hu, Qian Zhang, Junfeng Niu, Donghao Wang, Shiqiang Wang, Yang Dong, Eva Čellárová, Zhezhi Wang: Whole-genome sequence data of Hypericum perforatum and functional characterization of melatonin biosynthesis by N-acetylserotonin O-methyltransferase. Journal of Pineal Research (2020), doi: 10.1111/jpi.12709

Linda Petijová, Zuzana Jurčacková, Eva Čellárová: Computational screening of miRNAs and their targets in leaves of Hypericum spp. by transcriptome-mining: a pilot study. Planta, vol. 251(2020)

Katarína Kimáková, Linda Petijová, Katarína Bruňáková, Eva Čellárová: Relation between hypericin content and morphometric leaf parameters in Hypericum spp.: a case of cubic degree polynomial function. Plant Science, vol. 271(2018)

Linda Petijová, Katarína Bruňáková, Jiří Zámečník, Daniela Zubrická, Anna Mišianiková, Katarína Kimáková and Eva Čellárová: Relation between frost tolerance and post-cryogenic recovery in Hypericum spp. Cryoletters, vol. 35(2014)

VI.3 - The most significant research/artistic/other outputs over the last six years

Linda Petijová, Zuzana Jurčacková, Eva Čellárová: Computational screening of miRNAs and their targets in leaves of Hypericum spp. by transcriptome-mining: a pilot study. Planta, vol. 251(2020)

Miroslava Bálintová, Katarína Bruňáková, Linda Petijová, Eva Čellárová: Targeted metabolomic profiling reveals interspecific variation in the genus Hypericum in response to biotic elicitors. Plant Physiology and Biochemistry, vol. 135 (2019)

VI.4 - The most significant citations corresponding to the research/artistic/other outputs

Citations:

[1] (2021) CHANG, Jingjing - GUO, Yanliang - YAN, Jingyi - ZHANG, Zixing - YUAN, Li - WEI, Chunhua - ZHANG, Yong - MA, Jianxiang - YANG, Jianqiang - ZHANG, Xian - LI, Hao. The role of watermelon caffeic acid O-methyltransferase (ClCOMT1) in melatonin biosynthesis and abiotic stress tolerance. In Horticulture Research, 2021, roč. 8, č. 1.

[1] (2021) CHENG, Qi Qing - OUYANG, Yue - TANG, Zi Yu - LAO, Chi Chou - ZHANG, Yan Yu - CHENG, Chun Song - ZHOU, Hua. Review on the Development and Applications of Medicinal Plant Genomes. In Frontiers in Plant Science, 2021, roč. 12, č. 12.

[1] (2021) ZHANG, Yue - CHEN, Huijie - ZOU, Mengmeng - OERLEMANS, Rick - SHAO, Changhao - REN, Yudong - ZHANG, Ruili - HUANG, Xiaodan - LI, Guangxing - CONG, Yingying. Hypericin inhibit alpha-coronavirus replication by targeting 3cl protease. In Viruses, 2021, roč. 13, č. 9.

[1] (2021) WU, Xue Ming - GUAN, Qiu Yan - HAN, Yun Bin - WANG, Xin Cun - ZHUANG, Wen Ying - TAN, Ren Xiang. Regeneration of Phytochemicals by Structure-Driven Organization of Microbial Biosynthetic Steps. In Angewandte Chemie, 2021.

[1] (2022) ALAMI, Mohammad Murtaza - OUYANG, Zhen - ZHANG, Yipeng - SHU, Shaohua - YANG, Guozheng - MEI, Zhinan - WANG, Xuekui. The Current Developments in Medicinal Plant Genomics Enabled the Diversification of Secondary Metabolites’ Biosynthesis. In International journal of molecular sciences, 2022, roč. 23, č. 24.

[1] (2022) CLAUDE, Sivagami Jean - PARK, Seongjun - PARK, Seon Joo. Gene loss, genome rearrangement, and accelerated substitution rates in plastid genome of Hypericum ascyron (Hypericaceae). In BMC Plant Biology, 2022, roč. 22, č. 1.

[1] (2022) GUO, Li - YAO, Hui - CHEN, Weikai - WANG, Xumei - YE, Peng - XU, Zhichao - ZHANG, Sisheng - WU, Hong. Natural products of medicinal plants: biosynthesis and bioengineering in post-genomic era. In Horticulture Research, 2022, roč. 9.

[1] (2022) LITWACK, Gerald. Hormones. Amsterdam : Elsevier, 2022. ISBN 9780323984607.

[1] (2022) LIU, Ying - WANG, Xiaoyun - LV, Hongmei - CAO, Meng - LI, Yongchong - YUAN, Xiaowei - ZHANG, Xichun - GUO, Yang Dong - ZHANG, Na. Anabolism and signaling pathways of phytomelatonin. In Journal of Experimental Botany, 2022, roč. 73, č. 17, s. 5801-5817.

[1] (2022) PRADEEP, Matam - FRANKLIN, Gregory. Understanding the hypericin biosynthesis via reversible inhibition of dark gland development in Hypericum perforatum L.. In Industrial Crops and Products, 2022, roč. 182.

[1] (2022) WU, Song - MALACO MOROTTI, Ana Luisa - WANG, Shanshan - WANG, Ya - XU, Xiaoyan - CHEN, Jianghua - WANG, Guodong - TATSIS, Evangelos C.. Convergent gene clusters underpin hyperforin biosynthesis in St John's wort. In New Phytologist, 2022, roč. 235, č. 2, s. 646-661.

[1] (2023) GAO, Yangyang - CHEN, Huimin - CHEN, Dongyu - HAO, Gefei. Genetic and evolutionary dissection of melatonin response signaling facilitates the regulation of plant growth and stress responses. In Journal of Pineal Research, 2023, roč. 74, č. 2.

Linda Petijová, Zuzana Jurčacková, Eva Čellárová: Computational screening of miRNAs and their targets in leaves of Hypericum spp. by transcriptome-mining: a pilot study. Planta, vol. 251(2020)

Citations:

[1] (2021) AGHDAM, Shiva Abdollahi - BROWN, Amanda May Vivian. Deep learning approaches for natural product discovery from plant endophytic microbiomes. In Environmental Microbiomes, 2021, roč. 16, č. 1.

[1] (2021) TAHERI-DEHKORDI, Ayat - NADERI, Roohangiz - MARTINELLI, Federico - SALAMI, Seyed Alireza. Computational screening of miRNAs and their targets in saffron (Crocus sativus L.) by transcriptome mining. In Planta, 2021, roč. 254, č. 6.

[1] (2021) WANG, Zhuqing - SUN, Xueping - ZHANG, Xiaoming - DONG, Bo - YU, Haiyan. Development of a miRNA Sensor by an Inducible CRISPR-Cas9 Construct in Ciona Embryogenesis. In Molecular Biotechnology, 2021, roč. 63, č. 7, s. 613-620.

[1] (2021) ZHENG, Xiao Yu - CHEN, Min - LI, Hang - ZHAO, Shu Juan. Research methods of miRNA in plants and research progress of miRNA in medicinal plants. In Yao xue xue bao, 2021, roč. 56, č. 12, s. 3460-3472.

[1] (2022) SUN, Mingyang - XU, Shiqiang - MEI, Yu - LI, Jingyu - GU, Yan - ZHANG, Wenting - WANG, Jihua. MicroRNAs in Medicinal Plants. In International journal of molecular sciences, 2022, roč. 23, č. 18.

[1] (2022) ZHANG, Shanshan - WU, Yaqiong - HUANG, Xin - WU, Wenlong - LYU, Lianfei - LI, Weilin. Research progress about microRNAs involved in plant secondary metabolism. In International Journal of Biological Macromolecules, 2022, roč. 216, s. 820-829.

Katarína Nigutová, Souvik Kusari, Selahaddin Sezgin, Linda Petijová, Jana Henzelyová, Miroslava Bálintová, Michael Spiteller, Eva Čellárová: Chemometric evaluation of hypericin and related phytochemicals in 17 in vitro cultured Hypericum species, hairy root cultures and hairy root-derived transgenic plants. The Journal of Pharmacy and Pharmacology (2017), doi:10.1111/jphp.12782

Citations:

[1] (2018) JI, Yuan Yuan - NEGRIN, Adam - KENNELLY, J. Edward - LONG, Chun Lin. Chemical constituents of Hypericum stellatum and their antioxidant bioactivities. In China Journal of Chinese Materia Medica, 2018, roč. 43, č. 18, s. 3701-3707.

[1] (2019) BARNES, Joanne - ARNASON, John T. - ROUFOGALIS, Basil D.. St John's wort (Hypericum perforatum L.): botanical, chemical, pharmacological and clinical advances. In Journal of Pharmacy and Pharmacology, 2019, roč. 71, č. 1, s. 1-3.

[1] (2019) GAID, Mariam - GROSCH, Jan Hendrik - MÖLLER, Steve - BEERHUES, Ludger - KRULL, Rainer. Toward enhanced hyperforin production in St. John's wort root cultures. In Engineering in Life Sciences, 2019, roč. 19, č. 12, s. 916-930.

[1] (2019) NAZARENKO, D.V., RODIN, I., SHPIGUN, O.A. The Use of Machine Learning in the Analytical Control of the Preparations of Medicinal Plants. In Inorganic Materials, 2019, vol. 55, no. 14, s. 1428-1438.

[1] (2020) GÖNENÇ, Tuba Mert - OZTURK, Munir - TÜRKSEVEN, Süleyman Gürdal - KIRMIZIBAYRAK, Petek Ballar - GÜNAL, Selin - YILMAZ, Sinem. Hypericum perforatum l.: An overview of the anticancer potencies of the specimens collected from different ecological environments. In Pakistan Journal of Botany [online] 2020, roč. 52, č. 3, s. 1003-1010.

[1] (2020) KOWALCZYK, Tomasz - WIECZFINSKA, Joanna - SKAŁA, Ewa - ŚLIWIŃSKI, Tomasz - SITAREK, Przemysław. Transgenesis as a tool for the efficient production of selected secondary metabolites from in vitro plant cultures. In Plants-Basel, 2020, roč. 9, č. 2.

[1] (2020) PRADEEP, Matam - KACHLICKI, Piotr - FRANKLIN, Gregory. Simultaneous determination of naphtodianthrones, emodin, skyrin and new bisanthrones in Hypericum perforatum L. in vitro shoot cultures. In Industrial Crops and Products, 2020, č. 144.

[1] (2020) TIAN, Chunlian - CHANG, Yu - LIU, Xin - ZHANG, Zehui - GUO, Yuru - LAN, Zhiwei - ZHANG, Peng - LIU, Mingchun. Anti-inflammatory activity in vitro, extractive process and HPLC-MS characterization of total saponins extract from Tribulus terrestris L. fruits. In Industrial Crops and Products, 2020, č. 150.

[1] (2020) ZHOU, Wen - ZHANG, Qian - SUN, Yan - YANG, Lei - WANG, Zhezhi. Genome-wide identification and characterization of R2R3-MYB family in Hypericum perforatum under diverse abiotic stresses. In International Journal of Biological Macromolecules, 2020, č. 145, s. 341-354.

[1] (2021) PAPONOV, Martina - ANTONYAN, Manya - SLIMESTAD, Rune - PAPONOV, Ivan A.. Decoupling of plant growth and accumulation of biologically active compounds in leaves, roots, and root exudates of hypericum perforatum l. By the combination of jasmonate and far‐red lighting. In Biomolecules, 2021, roč. 11, č. 9.

[1] (2020) YAMAN, Cennet. Phytochemicals and antioxidant capacity of wild growing and in vitro Hypericum heterophyllum. In Romanian biotechnological letters, 2020, roč. 25, č. 6, s. 2111-2117.

[1] (2022) YAMAN, C. - ÖNLÜ, - AHMED, H. A.A. - ERENLER, R.. COMPARISON OF PHYTOCHEMICALS AND ANTIOXIDANT CAPACITY OF HYPERICUM PERFORATUM; WILD PLANT PARTS AND IN VITRO SAMPLES. In Journal of Animal and Plant Sciences, 2022, roč. 32, č. 2, s. 596-603.

VI.5 - Participation in conducting (leading) the most important research projects or art projects over the last six years

VEGA 1/0546/22: Anthraquinone biosynthetic gene clusters: Analogy between endophyte and plant host? (2022-2025, principal investigator)

APVV 18-0125: Novel anthraquinones from natural sources for biomedical applications (2019-2023)

VEGA 1/0013/19: Biosynthetic gene clusters of skyrin in endophytic fungi: A key for elucidation hypericin biosynthesis in the genus Hypericum? (2019-2022)

APVV-14 0154: Transcriptome, metabolome and signalome of bioactive compounds with anticancer eects in the genus (2015-2018)

SK-CN-2015-0026: Transcriptome analysis of Hypericum spp. for identification of candidate genes in biosynthesis of bioactive substances

VII. - Overview of organizational experience related to higher education and research/artistic/other activities

VIII. - Overview of international mobilities and visits oriented on education and research/artistic/other activities in the given field of study

VIII.a - Name of the institution	VIII.b - Address of the institution	VIII.c - Duration (indicate the duration of stay)	VIII.d - Mobility scheme, employment contract, other (describe)
Research Institure of Crop Production	Drnovská 507, 161 00 Praha 6, Czech Republic	01.-14.07.2012	APVV-040-10
Sofia University St. Kliment Ohridski	bul. "Tsar Osvoboditel" 15, 1504 Sofia Center, Sofia, Bulgaria	15.-21.09.2012	APVV SK-BG 0012-10
Shaanxi Normal University, National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest of China, Faculty of Life Science	Chang'an District, Xi'an, China	15.-27.09.2017	APVV SK-CN-2015-0026
CEITEC - Central European Institute of Technology, Central Laboratory of Genomics	Kamenice 753/5, Brno, Česká republika	13.07.-26.07.2021	ERASMUS +

IX. - Other relevant facts

Date of last update

2023-08-25